Plot attrPAM results — lets.plot.attrpam • letsR

Plots the richness (or a single species) in the attribute (trait) space generated by lets.attrpam.

Usage

lets.plot.attrpam(x, species = NULL, col_rich = NULL, ...)

Arguments

x: A list returned by lets.attrpam.
species: Optional. A character string with the name of a species to highlight. If provided, plots its presence in trait space.
col_rich: Optional. A color palette function or vector. If `NULL`, a default palette is used (red ramp for species maps, red–white ramp for richness).
...: Additional arguments passed to plot().

Details

Plot an Attribute-space PAM

Examples

if (FALSE) { # \dontrun{
# Example with simulated traits
n <- 2000
Species <- paste0("sp", 1:n)
trait_a <- rnorm(n)
trait_b <- trait_a * 0.2 + rnorm(n)  # correlated trait
df <- data.frame(Species, trait_a, trait_b)

# Build AttrPAM
x <- lets.attrpam(df, n_bins = 30)
lets.plot.attrpam(x)
} # }